* Fix Dependabot security updates and bump GitPython to 3.1.47+
Dependabot's uv ecosystem resolver was inferring Python 3.9 from the
workspace root's requires-python, then failing because sub-packages
require >=3.12. Adding .python-version=3.12 tells the resolver to use
a compatible Python. Also bumps gitpython>=3.1.47 to resolve the two
open security advisories (GHSA unsafe option check, command injection).
* Bump codeflash-core and codeflash-python versions for release
* chore: add gitignore entries for local eval repos, e2e fixtures, and env files
* fix: restore clean bubble_sort_method.py test fixture
The call-site ID commit re-contaminated this file with instrumentation
decorators, causing tests to fail with missing CODEFLASH_LOOP_INDEX.
* fix: resolve ruff and mypy errors in codeflash-python
- Add import-not-found ignores for optional torch/jax imports
- Extract magic column index to _STDOUT_COLUMN_INDEX constant
- Fix unused variable in _instrument_sync.py
- Cast cpu_time_ns to int for mypy arg-type
* fix: add skip markers for optional deps and apply ruff formatting to tests
Skip torch/jax/tensorflow tests when those packages are not installed.
Move has_module helper to conftest.py for reuse across test files.
Apply ruff format to all test files that drifted.
* fix: resolve remaining ruff format and mypy errors
- Add missing blank line in conftest.py (ruff format)
- Remove unused import-untyped ignore on jax import (mypy unused-ignore)
- Add type: ignore comments for object-typed SQLite row values
* chore: bump codeflash-python to 0.1.1.dev0
