* chore: add gitignore entries for local eval repos, e2e fixtures, and env files
* fix: restore clean bubble_sort_method.py test fixture
The call-site ID commit re-contaminated this file with instrumentation
decorators, causing tests to fail with missing CODEFLASH_LOOP_INDEX.
* fix: resolve ruff and mypy errors in codeflash-python
- Add import-not-found ignores for optional torch/jax imports
- Extract magic column index to _STDOUT_COLUMN_INDEX constant
- Fix unused variable in _instrument_sync.py
- Cast cpu_time_ns to int for mypy arg-type
* fix: add skip markers for optional deps and apply ruff formatting to tests
Skip torch/jax/tensorflow tests when those packages are not installed.
Move has_module helper to conftest.py for reuse across test files.
Apply ruff format to all test files that drifted.
* fix: resolve remaining ruff format and mypy errors
- Add missing blank line in conftest.py (ruff format)
- Remove unused import-untyped ignore on jax import (mypy unused-ignore)
- Add type: ignore comments for object-typed SQLite row values
* chore: bump codeflash-python to 0.1.1.dev0
The async behavior decorator now captures stdout per invocation via
io.StringIO into a new `stdout` column in the async_results SQLite
table. The result merger prefers data-sourced stdout over XML stdout,
fixing the root cause of empty stdout in merged async results.
Also fixes: duplicate async parse block in _parse_results.py,
CODEFLASH_RUN_TMPDIR propagation to subprocesses, and removes
dead async code from _stdout_parsers.py and _wrap_decorator.py.
Measure both wall-clock time (perf_counter_ns) and CPU thread time
(thread_time_ns) in instrumented test code. cpu_runtime is now a required
int field on FunctionTestInvocation, stored in the SQLite test_results
table as a 10th column.
Also fixes the sleeptime.py bug (10e9 → 1e9 divisor) and removes the
binary pickle parser (parse_test_return_values_bin) since no writer
exists in the current codebase — SQLite is the sole data capture path.
* Fix mypy errors and apply ruff formatting across packages
Fix ast.FunctionDef calls missing type_params for Python 3.12+,
correct type: ignore error codes in _comparator and _plugin, and
run ruff format on all package source and test files.
* Switch CI to prek for lint/typecheck checks
Use j178/prek-action for consistent lint+typecheck (ruff check,
ruff format, interrogate, mypy) matching local pre-commit config.
Keep test as a separate parallel job for test-env support.
