fix omni-java

codeflash/code_utils/config_consts.py

@@ -10,6 +10,7 @@ INDIVIDUAL_TESTCASE_TIMEOUT = 15  # For Python pytest
 JAVA_TESTCASE_TIMEOUT = 120  # Java Maven tests need more time due to startup overhead
 MAX_FUNCTION_TEST_SECONDS = 60
 MIN_IMPROVEMENT_THRESHOLD = 0.05
+MIN_IMPROVEMENT_THRESHOLD_JAVA = 0.02
 MIN_THROUGHPUT_IMPROVEMENT_THRESHOLD = 0.10  # 10% minimum improvement for async throughput
 MIN_CONCURRENCY_IMPROVEMENT_THRESHOLD = 0.20  # 20% concurrency ratio improvement required
 CONCURRENCY_FACTOR = 10  # Number of concurrent executions for concurrency benchmark

codeflash/languages/java/instrumentation.py

@@ -508,11 +508,23 @@ def _add_behavior_instrumentation(source: str, class_name: str, func_name: str)
                             )
                             wrapped_body_lines.append(serialize_line)
 
-                        # Check if the line is now just a variable reference (invalid statement)
-                        # This happens when the original line was just a void method call
-                        # e.g., "BubbleSort.bubbleSort(original);" becomes "_cf_result1_1;"
+                        # Check if the line is now just a variable reference (invalid statement).
+                        # This happens when the original line was just a void method call:
+                        #   "BubbleSort.bubbleSort(original);" becomes "_cf_result1_1;"
+                        # It also happens when assertThrows was transformed to try-catch:
+                        #   "try { func(args); } catch (...) {}" becomes
+                        #   "try { _cf_result1_1; } catch (...) {}"
+                        # A bare variable is not a valid Java statement.
                         stripped_new = new_line.strip().rstrip(";").strip()
-                        if stripped_new and stripped_new not in (var_name, var_with_cast):
+                        is_bare_var = stripped_new in (var_name, var_with_cast)
+                        is_try_with_bare_var = bool(re.match(
+                            r"try\s*\{\s*(?:"
+                            + re.escape(var_name)
+                            + (r"|" + re.escape(var_with_cast) if var_with_cast != var_name else "")
+                            + r")\s*;\s*\}\s*catch\s*\(",
+                            stripped_new,
+                        ))
+                        if stripped_new and not is_bare_var and not is_try_with_bare_var:
                             wrapped_body_lines.append(new_line)
                     else:
                         wrapped_body_lines.append(body_line)
@@ -834,7 +846,7 @@ def instrument_generated_java_test(
     original_class_name = class_match.group(1)
 
 
-    # For performance mode, add timing instrumentation
+    # Add mode-specific instrumentation
     # Use original class name (without suffix) in timing markers for consistency with Python
     if mode == "performance":
 

codeflash/languages/java/replacement.py

@@ -33,10 +33,11 @@ class ParsedOptimization:
     target_method_source: str
     new_fields: list[str]  # Source text of new fields to add
     new_helper_methods: list[str]  # Source text of new helper methods to add
+    new_imports: list[str]  # Import statements to add (e.g., "import java.nio.file.Files;")
 
 
 def _parse_optimization_source(new_source: str, target_method_name: str, analyzer: JavaAnalyzer) -> ParsedOptimization:
-    """Parse optimization source to extract method and additional class members.
+    """Parse optimization source to extract method, imports, and additional class members.
 
     The new_source may contain:
     - Just a method definition
@@ -48,13 +49,20 @@ def _parse_optimization_source(new_source: str, target_method_name: str, analyze
         analyzer: JavaAnalyzer instance.
 
     Returns:
-        ParsedOptimization with the method and any additional members.
+        ParsedOptimization with the method, imports, and any additional members.
 
     """
     new_fields: list[str] = []
     new_helper_methods: list[str] = []
     target_method_source = new_source  # Default to the whole source
 
+    # Extract import statements from the candidate code
+    new_imports: list[str] = []
+    for imp in analyzer.find_imports(new_source):
+        prefix = "import static " if imp.is_static else "import "
+        suffix = ".*" if imp.is_wildcard else ""
+        new_imports.append(f"{prefix}{imp.import_path}{suffix};")
+
     # Check if this is a full class or just a method
     classes = analyzer.find_classes(new_source)
 
@@ -92,10 +100,57 @@ def _parse_optimization_source(new_source: str, target_method_name: str, analyze
                 new_fields.append(field.source_text)
 
     return ParsedOptimization(
-        target_method_source=target_method_source, new_fields=new_fields, new_helper_methods=new_helper_methods
+        target_method_source=target_method_source,
+        new_fields=new_fields,
+        new_helper_methods=new_helper_methods,
+        new_imports=new_imports,
     )
 
 
+def _add_missing_imports(source: str, candidate_imports: list[str], analyzer: JavaAnalyzer) -> str:
+    """Add import statements from the optimization candidate that are missing in the original source.
+
+    Args:
+        source: The original source code.
+        candidate_imports: Import statements from the candidate (e.g., ["import java.nio.file.Files;"]).
+        analyzer: JavaAnalyzer instance.
+
+    Returns:
+        Source code with missing imports added.
+
+    """
+    existing_imports = analyzer.find_imports(source)
+    existing_import_strs = set()
+    for imp in existing_imports:
+        prefix = "import static " if imp.is_static else "import "
+        suffix = ".*" if imp.is_wildcard else ""
+        existing_import_strs.add(f"{prefix}{imp.import_path}{suffix};")
+
+    missing_imports = [imp for imp in candidate_imports if imp not in existing_import_strs]
+    if not missing_imports:
+        return source
+
+    logger.debug("Adding %d missing imports: %s", len(missing_imports), missing_imports)
+
+    # Insert after the last existing import, or after the package declaration
+    lines = source.splitlines(keepends=True)
+    insert_line = 0
+
+    if existing_imports:
+        insert_line = max(imp.end_line for imp in existing_imports)
+    else:
+        # No existing imports — insert after package declaration
+        for i, line in enumerate(lines):
+            if line.strip().startswith("package "):
+                insert_line = i + 1
+                break
+
+    import_block = "".join(imp + "\n" for imp in missing_imports)
+    before = lines[:insert_line]
+    after = lines[insert_line:]
+    return "".join(before) + import_block + "".join(after)
+
+
 def _insert_class_members(
     source: str, class_name: str, fields: list[str], methods: list[str], analyzer: JavaAnalyzer
 ) -> str:
@@ -237,6 +292,10 @@ def replace_function(
     # Parse the optimization to extract components
     parsed = _parse_optimization_source(new_source, func_name, analyzer)
 
+    # Add any new imports from the optimization candidate
+    if parsed.new_imports:
+        source = _add_missing_imports(source, parsed.new_imports, analyzer)
+
     # Find the method in the original source
     methods = analyzer.find_methods(source)
     target_method = None

codeflash/optimization/function_optimizer.py

@@ -48,6 +48,7 @@ from codeflash.code_utils.config_consts import (
     COVERAGE_THRESHOLD,
     INDIVIDUAL_TESTCASE_TIMEOUT,
     MIN_CORRECT_CANDIDATES,
+    MIN_IMPROVEMENT_THRESHOLD_JAVA,
     OPTIMIZATION_CONTEXT_TOKEN_LIMIT,
     REFINED_CANDIDATE_RANKING_WEIGHTS,
     REPEAT_OPTIMIZATION_PROBABILITY,
@@ -1364,6 +1365,8 @@ class FunctionOptimizer:
         eval_ctx.record_successful_candidate(candidate.optimization_id, candidate_result.best_test_runtime, perf_gain)
 
         # Check if this is a successful optimization
+        # Use a lower threshold for Java where I/O-bound functions have smaller optimization margins
+        java_override = MIN_IMPROVEMENT_THRESHOLD_JAVA if self.language_support.language == "java" else None
         is_successful_opt = speedup_critic(
             candidate_result,
             original_code_baseline.runtime,
@@ -1372,6 +1375,7 @@ class FunctionOptimizer:
             best_throughput_until_now=None,
             original_concurrency_metrics=original_code_baseline.concurrency_metrics,
             best_concurrency_ratio_until_now=None,
+            min_improvement_override=java_override,
         ) and quantity_of_tests_critic(candidate_result)
 
         tree = self.build_runtime_info_tree(
@@ -2272,6 +2276,7 @@ class FunctionOptimizer:
                         fto_benchmark_timings=self.function_benchmark_timings,
                         total_benchmark_timings=self.total_benchmark_timings,
                     )
+                java_override = MIN_IMPROVEMENT_THRESHOLD_JAVA if self.language_support.language == "java" else None
                 acceptance_reason = get_acceptance_reason(
                     original_runtime_ns=original_code_baseline.runtime,
                     optimized_runtime_ns=best_optimization.runtime,
@@ -2279,6 +2284,7 @@ class FunctionOptimizer:
                     optimized_async_throughput=best_optimization.async_throughput,
                     original_concurrency_metrics=original_code_baseline.concurrency_metrics,
                     optimized_concurrency_metrics=best_optimization.concurrency_metrics,
+                    min_improvement_override=java_override,
                 )
                 explanation = Explanation(
                     raw_explanation_message=best_optimization.candidate.explanation,

codeflash/optimization/optimizer.py

@@ -117,6 +117,38 @@ class Optimizer:
         except Exception as e:
             logger.debug(f"Failed to verify JS requirements: {e}")
 
+    def _setup_java_runtime(self) -> None:
+        from pathlib import Path as _Path
+
+        from codeflash.languages.java.build_tools import add_codeflash_dependency_to_pom, install_codeflash_runtime
+
+        runtime_jar = _Path(__file__).parent.parent / "languages" / "java" / "resources" / "codeflash-runtime-1.0.0.jar"
+        project_root = self.args.project_root
+
+        if not runtime_jar.exists():
+            logger.warning("codeflash-runtime JAR not found at %s, behavior capture may not work", runtime_jar)
+            return
+
+        if not install_codeflash_runtime(project_root, runtime_jar):
+            logger.warning("Failed to install codeflash-runtime to local Maven repo")
+            return
+
+        # Add dependency to the test module's pom.xml (or root pom.xml)
+        test_root = _Path(self.args.tests_root) if hasattr(self.args, "tests_root") and self.args.tests_root else None
+        pom_path = project_root / "pom.xml"
+
+        # For multi-module projects, find the test module's pom.xml
+        if test_root and test_root != project_root:
+            candidate = test_root
+            while candidate != project_root and candidate != candidate.parent:
+                if (candidate / "pom.xml").exists():
+                    pom_path = candidate / "pom.xml"
+                    break
+                candidate = candidate.parent
+
+        if pom_path.exists():
+            add_codeflash_dependency_to_pom(pom_path)
+
     def run_benchmarks(
         self, file_to_funcs_to_optimize: dict[Path, list[FunctionToOptimize]], num_optimizable_functions: int
     ) -> tuple[dict[str, dict[BenchmarkKey, float]], dict[BenchmarkKey, float]]:
@@ -495,6 +527,8 @@ class Optimizer:
                         self.test_cfg.js_project_root = self._find_js_project_root(file_path)
                         # Verify JS requirements before proceeding
                         self._verify_js_requirements()
+                    elif is_java():
+                        self._setup_java_runtime()
                     break
 
         if self.args.all:

codeflash/result/critic.py

@@ -72,6 +72,7 @@ def speedup_critic(
     best_throughput_until_now: int | None = None,
     original_concurrency_metrics: ConcurrencyMetrics | None = None,
     best_concurrency_ratio_until_now: float | None = None,
+    min_improvement_override: float | None = None,
 ) -> bool:
     """Take in a correct optimized Test Result and decide if the optimization should actually be surfaced to the user.
 
@@ -92,7 +93,8 @@ def speedup_critic(
     - Concurrency improvements detect when blocking calls are replaced with non-blocking equivalents
     """
     # Runtime performance evaluation
-    noise_floor = 3 * MIN_IMPROVEMENT_THRESHOLD if original_code_runtime < 10000 else MIN_IMPROVEMENT_THRESHOLD
+    threshold = min_improvement_override if min_improvement_override is not None else MIN_IMPROVEMENT_THRESHOLD
+    noise_floor = 3 * threshold if original_code_runtime < 10000 else threshold
     if not disable_gh_action_noise and env_utils.is_ci():
         noise_floor = noise_floor * 2  # Increase the noise floor in GitHub Actions mode
 
@@ -146,13 +148,15 @@ def get_acceptance_reason(
     optimized_async_throughput: int | None = None,
     original_concurrency_metrics: ConcurrencyMetrics | None = None,
     optimized_concurrency_metrics: ConcurrencyMetrics | None = None,
+    min_improvement_override: float | None = None,
 ) -> AcceptanceReason:
     """Determine why an optimization was accepted.
 
     Returns the primary reason for acceptance, with priority:
     concurrency > throughput > runtime (for async code).
     """
-    noise_floor = 3 * MIN_IMPROVEMENT_THRESHOLD if original_runtime_ns < 10000 else MIN_IMPROVEMENT_THRESHOLD
+    threshold = min_improvement_override if min_improvement_override is not None else MIN_IMPROVEMENT_THRESHOLD
+    noise_floor = 3 * threshold if original_runtime_ns < 10000 else threshold
     if env_utils.is_ci():
         noise_floor = noise_floor * 2
 

codeflash/verification/verifier.py

@@ -122,6 +122,21 @@ def generate_tests(
             )
 
             logger.debug(f"Instrumented Java tests locally for {func_name}")
+            logger.debug(
+                f"=== Java Generated Tests (raw) for {func_name} ===\n"
+                f"{generated_test_source}\n"
+                f"=== End Java Generated Tests ==="
+            )
+            logger.debug(
+                f"=== Java Instrumented Behavior Tests for {func_name} ===\n"
+                f"{instrumented_behavior_test_source}\n"
+                f"=== End Java Instrumented Behavior Tests ==="
+            )
+            logger.debug(
+                f"=== Java Instrumented Perf Tests for {func_name} ===\n"
+                f"{instrumented_perf_test_source}\n"
+                f"=== End Java Instrumented Perf Tests ==="
+            )
         else:
             # Python: instrumentation is done by aiservice, just replace temp dir placeholders
             instrumented_behavior_test_source = instrumented_behavior_test_source.replace(

tests/test_languages/test_java/test_instrumentation.py

@@ -915,6 +915,7 @@ class TestInstrumentGeneratedJavaTest:
         1. Remove assertions containing the target function call
         2. Capture the function return value instead
         3. Rename the class with __perfinstrumented suffix
+        4. Add SQLite behavior instrumentation to capture return values
         """
         test_code = """import org.junit.jupiter.api.Test;
 
@@ -932,17 +933,16 @@ public class CalculatorTest {
             mode="behavior",
         )
 
-        # Behavior mode transforms assertions to capture return values
-        expected = """import org.junit.jupiter.api.Test;
-
-public class CalculatorTest__perfinstrumented {
-    @Test
-    public void testAdd() {
-        Object _cf_result1 = new Calculator().add(2, 2);
-    }
-}
-"""
-        assert result == expected
+        # Behavior mode transforms assertions, renames class, and adds SQLite instrumentation
+        assert "class CalculatorTest__perfinstrumented" in result
+        assert "import java.sql.Connection;" in result
+        assert "import java.sql.DriverManager;" in result
+        assert "import java.sql.PreparedStatement;" in result
+        assert "CODEFLASH_OUTPUT_FILE" in result
+        assert "CREATE TABLE IF NOT EXISTS test_results" in result
+        assert "INSERT INTO test_results VALUES" in result
+        assert "_cf_serializedResult1" in result
+        assert "com.codeflash.Serializer.serialize" in result
 
     def test_instrument_generated_test_performance_mode(self):
         """Test instrumenting generated test in performance mode with inner loop."""

tests/test_languages/test_java/test_replacement.py

@@ -647,7 +647,8 @@ public class NullChecker {{
 
         assert result is True
         new_code = java_file.read_text(encoding="utf-8")
-        expected = """public class NullChecker {
+        expected = """import java.util.Objects;
+public class NullChecker {
     public boolean isEqual(String s1, String s2) {
         return Objects.equals(s1, s2);
     }